BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036G04LP1|AL430277
(921 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1370 1818 0.0
>3x_Contig1370
Length = 5848
Score = 1818 bits (917), Expect = 0.0
Identities = 920/921 (99%)
Strand = Plus / Minus
Query: 1 atcacttcttatttgagaactgaaggctggccagctttggccattcacggtgacaaggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5538 atcacttcttatttgagaactgaaggctggccagctttggccattcacggtgacaaggct 5479
Query: 61 cagaacgagcgtgattgggttttggctgagtttaggtccggtagatctcctatcatggta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5478 cagaacgagcgtgattgggttttggctgagtttaggtccggtagatctcctatcatggta 5419
Query: 121 gcaactgatgttgctgctagaggtattggtatgttattgaaatttaattttttcagcatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5418 gcaactgatgttgctgctagaggtattggtatgttattgaaatttaattttttcagcatt 5359
Query: 181 ggtttgaactttagtttacattgagactatcgtcaaacctttctactaactatattagac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5358 ggtttgaactttagtttacattgagactatcgtcaaacctttctactaactatattagac 5299
Query: 241 aactgtcgaagtcatttctttcgaaatgatcacgatatgcctttttattcgaatgacacg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5298 aactgtcgaagtcatttctttcgaaatgatcacgatatgcctttttattcgaatgacacg 5239
Query: 301 gatgttttcgattcaaaggtaaaaaataatgagctggtcttattatttatcaacgaaatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5238 gatgttttcgattcaaaggtaaaaaataatgagctggtcttattatttatcaacgaaatc 5179
Query: 361 ctattggatttggtgcggacagagaaaaggatatgaaaatacttttcattttgacttcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5178 ctattggatttggtgcggacagagaaaaggatatgaaaatacttttcattttgacttcca 5119
Query: 421 caattattgataaagatttagagacttgaccagtccgatgtgatttgatttattcagatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5118 caattattgataaagatttagagacttgaccagtccgatgtgatttgatttattcagatc 5059
Query: 481 tctagaattaaaagtagattggcaagcttactagtattcatgacaatcaggttttgattg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5058 tctagaattaaaagtagattggcaagcttactagtattcatgacaatcaggttttgattg 4999
Query: 541 gaccgttgggttcgaatgtgtggtgaagtagcttttacacaacgtggttttctcgttgca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4998 gaccgttgggttcgaatgtgtggtgaagtagcttttacacaacgtggttttctcgttgca 4939
Query: 601 ttgaaggctgtgatgaattaccggacattcgatactttttctaatcatgttatcaatttg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4938 ttgaaggctgtgatgaattaccggacattcgatactttttctaatcatgttatcaatttg 4879
Query: 661 acatctctttgatgcaattttgctgagagatgttctttatttttaacatgatcgtttgag 720
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 4878 acatctctttgatgcaattttgctgaaagatgttctttatttttaacatgatcgtttgag 4819
Query: 721 ttagatcagattcgcgtatcattaattgtgcttagtagtagattggaacatgaacctaat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4818 ttagatcagattcgcgtatcattaattgtgcttagtagtagattggaacatgaacctaat 4759
Query: 781 gaaataaggattcattcattttaacaaagaggttaaagaattaaaaaactgataaaatag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4758 gaaataaggattcattcattttaacaaagaggttaaagaattaaaaaactgataaaatag 4699
Query: 841 cgtcacaggatggtttccctgttatgcaaagtgtgcattcagttttatttttgcgattcc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4698 cgtcacaggatggtttccctgttatgcaaagtgtgcattcagttttatttttgcgattcc 4639
Query: 901 tcttagtagttgttccatgta 921
|||||||||||||||||||||
Sbjct: 4638 tcttagtagttgttccatgta 4618
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7981
Number of Sequences: 1807
Number of extensions: 7981
Number of successful extensions: 61
Number of sequences better than 1.0e-20: 1
length of query: 921
length of database: 10,358,551
effective HSP length: 16
effective length of query: 905
effective length of database: 10,329,639
effective search space: 9348323295
effective search space used: 9348323295
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)